{
  "_id": "6a27ee4224555f66ed54b066",
  "Package": "YPBP",
  "Title": "Yang and Prentice Model with Baseline Distribution Modeled by\nBernstein Polynomials",
  "Version": "0.0.1",
  "Authors@R": "person(given = \"Fabio\", family = \"Demarqui\", email = \"fndemarqui@est.ufmg.br\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0001-9236-1986\"))",
  "Description": "Semiparametric modeling of lifetime data with crossing\nsurvival curves via Yang and Prentice model with baseline\nhazard/odds modeled with Bernstein polynomials. Details about\nthe model can be found in Demarqui et al. (2019)\n<arXiv:1910.04475>. Model fitting can be carried out via both\nmaximum likelihood and Bayesian approaches. The package also\nprovides point and interval estimation for the crossing\nsurvival times.",
  "License": "GPL (>= 2)",
  "URL": "https://github.com/fndemarqui/YPBP",
  "BugReports": "https://github.com/fndemarqui/YPBP/issues",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Biarch": "true",
  "SystemRequirements": "GNU make",
  "RoxygenNote": "7.1.0",
  "Config/pak/sysreqs": "make",
  "Repository": "https://fndemarqui.r-universe.dev",
  "Date/Publication": "2020-06-29 15:30:49 UTC",
  "RemoteUrl": "https://github.com/fndemarqui/YPBP",
  "RemoteRef": "HEAD",
  "RemoteSha": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-06-09 10:28:56 UTC",
    "User": "root"
  },
  "Author": "Fabio Demarqui [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-9236-1986>)",
  "Maintainer": "Fabio Demarqui <fndemarqui@est.ufmg.br>",
  "MD5sum": "fb8cc5313055d0aeb63ac2c39a6f49d4",
  "_user": "fndemarqui",
  "_type": "src",
  "_file": "YPBP_0.0.1.tar.gz",
  "_fileid": "bd3ac893ab17832dec0b75e35848946475f722dbd2fc254bdac114e340b6d7a3",
  "_filesize": 156530,
  "_sha256": "bd3ac893ab17832dec0b75e35848946475f722dbd2fc254bdac114e340b6d7a3",
  "_created": "2026-06-09T10:28:56.000Z",
  "_published": "2026-06-09T10:43:14.557Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 80301822554,
      "time": 303,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7505196189"
    },
    {
      "job": 80301822427,
      "time": 331,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7505205739"
    },
    {
      "job": 80301822607,
      "time": 294,
      "config": "linux-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7505192937"
    },
    {
      "job": 80301822387,
      "time": 368,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7505218465"
    },
    {
      "job": 80301822428,
      "time": 298,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7505205343"
    },
    {
      "job": 80301822425,
      "time": 677,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7505336261"
    },
    {
      "job": 80301822375,
      "time": 286,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7505202457"
    },
    {
      "job": 80301822388,
      "time": 389,
      "config": "macos-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7505238038"
    },
    {
      "job": 80300948227,
      "time": 306,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7505088202"
    },
    {
      "job": 80301822348,
      "time": 150,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "FAIL",
      "artifact": ""
    },
    {
      "job": 80301822373,
      "time": 395,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7505228004"
    },
    {
      "job": 80301822364,
      "time": 360,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7505215689"
    },
    {
      "job": 80301822384,
      "time": 456,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7505248321"
    }
  ],
  "_buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/fndemarqui/YPBP",
  "_commit": {
    "id": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
    "author": "fndemarqui <fndemarqui@gmail.com>",
    "committer": "fndemarqui <fndemarqui@gmail.com>",
    "message": "CRAN version 0.0.1\n",
    "time": 1593444649
  },
  "_maintainer": {
    "name": "Fabio Demarqui",
    "email": "fndemarqui@est.ufmg.br",
    "login": "fndemarqui",
    "orcid": "0000-0001-9236-1986",
    "description": "",
    "uuid": 30907827
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.4.0",
      "role": "Depends"
    },
    {
      "package": "survival",
      "role": "Depends"
    },
    {
      "package": "BH",
      "version": ">= 1.66.0",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 0.12.0",
      "role": "LinkingTo"
    },
    {
      "package": "RcppEigen",
      "version": ">= 0.3.3.3.0",
      "role": "LinkingTo"
    },
    {
      "package": "rstan",
      "version": ">= 2.18.1",
      "role": "LinkingTo"
    },
    {
      "package": "StanHeaders",
      "version": ">= 2.18.0",
      "role": "LinkingTo"
    },
    {
      "package": "Formula",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "methods",
      "role": "Imports"
    },
    {
      "package": "Rcpp",
      "version": ">= 0.12.0",
      "role": "Imports"
    },
    {
      "package": "rstan",
      "version": ">= 2.18.1",
      "role": "Imports"
    },
    {
      "package": "rstantools",
      "version": ">= 2.0.0",
      "role": "Imports"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "fndemarqui",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "fndemarqui",
      "count": 8,
      "uuid": 30907827
    }
  ],
  "_userbio": {
    "uuid": 30907827,
    "type": "user",
    "name": "Fábio N. Demarqui"
  },
  "_downloads": {
    "count": 223,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/YPBP"
  },
  "_devurl": "https://github.com/fndemarqui/ypbp",
  "_searchresults": 10,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/YPBP.html",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/fndemarqui/ypbp",
  "_realowner": "fndemarqui",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.0.1",
      "date": "2020-06-29"
    }
  ],
  "_exports": [
    "confint",
    "crossTime",
    "ypbp"
  ],
  "_datasets": [
    {
      "name": "gastric",
      "title": "Gastric cancer data set",
      "object": "gastric",
      "class": [
        "data.frame"
      ],
      "fields": [
        "time",
        "status",
        "trt"
      ],
      "rows": 90,
      "table": true,
      "tojson": true
    },
    {
      "name": "ipass",
      "title": "IRESSA Pan-Asia Study (IPASS) data set",
      "object": "ipass",
      "class": [
        "data.frame"
      ],
      "fields": [
        "time",
        "status",
        "arm"
      ],
      "rows": 1217,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "YPBP-package",
      "title": "The 'YPBP' package.",
      "topics": [
        "YPBP-package",
        "YPBP"
      ]
    },
    {
      "page": "coef.ypbp",
      "title": "Estimated regression coefficients",
      "topics": [
        "coef.ypbp"
      ]
    },
    {
      "page": "confint",
      "title": "Generic S3 method confint",
      "topics": [
        "confint"
      ]
    },
    {
      "page": "confint.ypbp",
      "title": "Confidence intervals for the regression coefficients",
      "topics": [
        "confint.ypbp"
      ]
    },
    {
      "page": "crossTime",
      "title": "Generic S3 method crossTime",
      "topics": [
        "crossTime"
      ]
    },
    {
      "page": "crossTime-methods",
      "title": "Computes the crossing survival times",
      "topics": [
        "crossTime.ypbp"
      ]
    },
    {
      "page": "gastric",
      "title": "Gastric cancer data set",
      "topics": [
        "gastric"
      ]
    },
    {
      "page": "ipass",
      "title": "IRESSA Pan-Asia Study (IPASS) data set",
      "topics": [
        "ipass"
      ]
    },
    {
      "page": "model.matrix.ypbp",
      "title": "Model.matrix method for ypbp models",
      "topics": [
        "model.matrix.ypbp"
      ]
    },
    {
      "page": "print.summary.ypbp",
      "title": "Print the summary.ypbp output",
      "topics": [
        "print.summary.ypbp"
      ]
    },
    {
      "page": "summary.ypbp",
      "title": "Summary for the ypbp model",
      "topics": [
        "summary.ypbp"
      ]
    },
    {
      "page": "survfit.ypbp",
      "title": "survfit method for ypbp models",
      "topics": [
        "survfit.ypbp"
      ]
    },
    {
      "page": "vcov.ypbp",
      "title": "Variance-covariance matrix for a ypbp model",
      "topics": [
        "vcov.ypbp"
      ]
    },
    {
      "page": "ypbp",
      "title": "Fits the Yang and Prentice using Bernstein polynomials to model the baseline distribution.",
      "topics": [
        "ypbp",
        "{ypbp}"
      ]
    }
  ],
  "_rundeps": [
    "abind",
    "backports",
    "BH",
    "callr",
    "checkmate",
    "cli",
    "cpp11",
    "desc",
    "distributional",
    "farver",
    "Formula",
    "generics",
    "ggplot2",
    "glue",
    "gridExtra",
    "gtable",
    "inline",
    "isoband",
    "labeling",
    "lattice",
    "lifecycle",
    "loo",
    "magrittr",
    "MASS",
    "Matrix",
    "matrixStats",
    "numDeriv",
    "otel",
    "pillar",
    "pkgbuild",
    "pkgconfig",
    "posterior",
    "processx",
    "ps",
    "QuickJSR",
    "R6",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "RcppParallel",
    "rlang",
    "rstan",
    "rstantools",
    "S7",
    "scales",
    "StanHeaders",
    "survival",
    "tensorA",
    "tibble",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "14.2.0-4ubuntu2~24.04.1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 2,
  "_indexed": true,
  "_nocasepkg": "ypbp",
  "_universes": [
    "fndemarqui"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.1",
      "date": "2026-06-09T10:33:08.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "1a4be3939975953a56d90f2d22150b2244a2c0d160da2d44e6b3ed85dccabb57",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.0.1",
      "date": "2026-06-09T10:33:04.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "ae46aae6c9528536eb1a3519bd5e0a146f409574d9d4bf76d03d6beb32e0499a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.0.1",
      "date": "2026-06-09T10:33:00.000Z",
      "distro": "noble",
      "arch": "aarch64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "e20efdba3a81d80ca5554ec4cf128c43bc6236d029db15685197edbd09f55247",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.0.1",
      "date": "2026-06-09T10:33:45.000Z",
      "distro": "noble",
      "arch": "x86_64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "b0fc62b0df35b69b3da1f8ae79d237784f296d869406422718014b1029573388",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.1",
      "date": "2026-06-09T10:33:12.000Z",
      "arch": "aarch64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "881fa8733ee74e1946c797ca9861475a6eec836f705ddcdfed1a288bfdbc666c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.0.1",
      "date": "2026-06-09T10:35:52.000Z",
      "arch": "x86_64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "936ec566bd6f589fe0fe98fa0b54195c6046fe823f0d97c81675d9b43a8da15c",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.0.1",
      "date": "2026-06-09T10:33:19.000Z",
      "arch": "aarch64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "ddd561c635cc6275b93e69b5439c2586635439a5ef8d6ac7b2d65128b0124722",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.0.1",
      "date": "2026-06-09T10:33:51.000Z",
      "arch": "x86_64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "9f9b54313800c101865abb4bb9332abd27c83d704b012e84fa7e842589246a21",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.0.1",
      "date": "2026-06-09T10:32:23.000Z",
      "arch": "x86_64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "dc4c796c15731a77dfae2680dd858d404862f35aa81bfa6ba5e62a4cb8f47ca4",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.0.1",
      "date": "2026-06-09T10:32:17.000Z",
      "arch": "x86_64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "4af7c0ed29e1b20388ce101a7bda18c6642e54be511e662f6ba7690e8aca7208",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.0.1",
      "date": "2026-06-09T10:33:28.000Z",
      "arch": "x86_64",
      "commit": "2b517de6a4f19cdb9247c826e7dccb85ffe6a933",
      "fileid": "3acf32618803cee6c2ddd913197d686385e360d23dec74662fd4885888da9a05",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/fndemarqui/actions/runs/27199878666"
    }
  ]
}